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2008 |
Brendan Elliott, Z. Meral Ozsoyoglu. Annotation Suggestion and Search for Personal Multimedia Objects on the Web. ACM CIVR 2008.
En Cheng, Brendan Elliott, Z. Meral Ozsoyoglu. Scalable Computation of Kinship and Identity Coefficients on Large Pedigrees. CSB 2008.
Sulieman Bani-Ahmad, Gultekin Ozsoyoglu. On Content-Driven Search - Keyword Suggesters for Literature Digital Libraries. JCDL 2008.
Nattakarn Ratprasartporn, Jonathan Po, Ali Cakmak, Sulieman Bani-Ahmad, Gultekin Ozsoyoglu. Context-Based Literature Digital Collection Search. VLDB (Very Large Databases) Journal, 2008 (In press).
Sulieman Bani-Ahmad, Gultekin Ozsoyoglu. elGiza: A Research-Pyramid Based Search Tool for Vertical Literature Digital Libraries, DBRank 2008.
Ali Cakmak, Gultekin Ozsoyoglu. Discovering Gene Annotations in Biomedical Text Databases. BMC Bioinformatics 2008, 9:143.
Mustafa Kirac, Gultekin Ozsoyoglu. Protein Function Prediction Based on Patterns in Biological Networks. 12th Annual Internation Conference on Research in Computational Molecular Biology (RECOMB), Singapore, March 30-April 2, 2008.
Ali Cakmak, Gultekin Ozsoyoglu. Taxonomy-Superimposed Graph Mining. 11th International Conference on Extending Database Technology (EDBT), Nantes, France, March 25-30, 2008.
2007
Brendan Elliott, Z. Meral Ozsoyoglu. A Comparison of Methods for Semantic Photo Annotation Suggestion. 22th International Symposium on Computer and Information Sciences (ISCIS), Ankara, Turkey, 2007.
Ali Cakmak, Gultekin Ozsoyoglu. Mining Biological Networks for Unknown Pathways. Bioinformatics 23(20): 2775-2783, October 2007.
Sulieman Bani-Ahmad, Gultekin Özsoyoglu: On Improved Publication Scores for Online Digital Libraries. ECDL Conf. Budapest, Hungary, September 2007.
Nattakarn Ratprasartporn, Gultekin Özsoyoglu: Finding Related Papers in Literature Digital Libraries. ECDL Conf., Budapest, Hungary, Sept. 2007.
Brendan Elliott, S. Fatih Akgul, Stephen Mayes, Meral Özsoyoglu. Efficient Evaluation of Inbreeding Queries on Pedigree Data. SSDBM 2007.
Ali Cakmak, Mustafa Kirac, Marc Reynolds, Meral Özsoyoglu, Gultekin Özsoyoglu. Gene Ontology-Based Annotation Analysis and Categorization of Metabolic Pathways. SSDBM 2007.
Nattakarn Ratprasartporn, Sulieman Bani-Ahmad, Ali Cakmak, Jonathan Po, Gultekin Özsoyoglu. Evaluating Different Ranking Functions for Context-Based Literature Search. DBRANK 2007.
Ali Cakmak, Gultekin Özsoyoglu. Annotating
Genes Using Textual Patterns. PSB 2007: 221-232. (PDF)
2006
Mustafa Kirac, Gultekin Özsoyoglu, Jiong Yang: Annotating
proteins by mining protein interaction networks. ISMB 2006:
260-270. (PDF)
Z. Meral Özsoyoglu, Gultekin Özsoyoglu, Joseph Nadeau.
Genomic Pathways Database and Biological Data Management. Animal
Genetics; 37 Suppl 1:41-7, August 2006. (PDF)
Mustafa Kirac, Ali Cakmak, Gultekin Özsoyoglu. Task-Oriented
Integrated Use of Biological Web Data Sources. SSDBM 20006. (PDF)
Brendan Elliott, S. Fatih Akgul, Meral Özsoyoglu. A Framework
for Querying Pedigree Data. SSDBM 2006. (PDF)
Nattakarn Ratprasartporn , Ali Cakmak, Gultekin Özsoyoglu.
On Data and Visualization Models for Signaling Pathways. SSDBM
2006. (PDF)
Sun S. Chung, Gultekin Özsoyoglu: Anti-Tamper Databases:
Processing Aggregate Queries over Encrypted Databases. ICDE
Workshops, 2006 (PDF)
2005
Wanhong Xu, Z. Meral Özsoyoglu: Rewriting XPath Queries
Using Materialized Views. VLDB 2005: 121-132 (PDF)
John Chmura, Nattakarn Ratprasartporn, Gultekin Özsoyoglu:
Scalability of Databases for Digital Libraries. ICADL 2005:
435-445 (PDF)
Sulieman Bani-Ahmad, Ali Cakmak, Gultekin Özsoyoglu, Abdullah
Al-Hamdani: Evaluating Publication Similarity Measures. IEEE
Data Eng. Bull. 28(4): 21-28 (2005) (PDF)
Sulieman Bani-Ahmad, Ali Cakmak, Abdullah Al-Hamdani, Gultekin Özsoyoglu. Evaluating Score and Publication Similarity Functions in Digital Libraries. ICADL 2005.
2004
Gultekin Özsoyoglu, Ismail Sengör Altingövde,
Abdullah Al-Hamdani, Selma Ayse Özel, Özgür Ulusoy,
Z. Meral Özsoyoglu: Querying web metadata: Native score
management and text support in databases. ACM Trans. Database
Syst. 29(4): 581-634 (2004)
Z. Meral Özsoyoglu, Joseph Nadeau, Gultekin Özsoyoglu,
Murat Tasan: Towards an Integrated Software System for Biological
Pathways. IEEE Data Eng. Bull. 27(4): 53-60 (2004)
Gultekin Özsoyoglu, Nevzat Hurkan Balkir, Z. Meral Özsoyoglu,
Graham Cormode: On Automated Lesson Construction from Electronic
Textbooks. IEEE Trans. Knowl. Data Eng. 16(3): 317-331 (2004)
Emre Karakoç, Z. Meral Özsoyoglu, Süleyman
Cenk Sahinalp, Murat Tasan, Xiang Zhang: Novel Approaches to
Biomolecular Sequence Indexing. IEEE Data Eng. Bull. 27(3):
40-47 (2004)
Scott Newman, Z. Meral Özsoyoglu: A Tree-Structured Query
Interface for Querying Semi-Structured Data. SSDBM 2004: 127-130
Murat Tasan, Z. Meral Özsoyoglu: Improvements in Distance-Based
Indexing. SSDBM 2004: 161-170
Selma Ayse Özel, Ismail Sengör Altingövde, Özgür
Ulusoy, Gultekin Özsoyoglu, Z. Meral Özsoyoglu: Metadata-based
modeling of information resources on the Web. JASIST 55(2):
97-110 (2004)
2003
Süleyman Cenk Sahinalp, Murat Tasan, Jai Macker, Z. Meral
Özsoyoglu: Distance Based Indexing for String Proximity
Search. ICDE 2003
Gultekin Özsoyoglu, David A. Singer, Sun S. Chung: Anti-Tamper
Databases: Querying Encrypted Databases. DBSec 2003: 133-146
Wei Yu, Z. Meral Özsoyoglu, Gultekin Özsoyoglu: XML
Restructuring and Integration for Tabular Data. DEXA 2003: 233-243
Abdullah Al-Hamdani, Gultekin Özsoyoglu: Selecting Topics
for Web Resource Discovery: Efficiency Issues in a Database
Approach.DEXA 2003: 792-802
Gultekin Özsoyoglu, Abdullah Al-Hamdani: Web Information
Resource Discovery: Past, Present, and Future. ISCIS 2003: 9-18
Wanhong Xu, Larkshmi Krishnamurthy, Murat Tasan, Gultekin Özsoyoglu,
Joseph H. Nadeau, Z. Meral Özsoyoglu, Greg Schaeffer: Pathways
Database System: An Integrated Set of Tools for Biological Pathways.
SAC 2003: 96-102
Larkshmi Krishnamurthy, Joseph H. Nadeau, Gultekin Özsoyoglu,
Z. Meral Özsoyoglu, Greg Schaeffer, Murat Tasan, Wanhong
Xu: Pathways Database System: An Integrated System for Biological
Pathways. Bioinformatics 19(8): 930-937 (2003)
Z. Meral Özsoyoglu, Joseph H. Nadeau, Gultekin Özsoyoglu:
Pathways Database System. OMICS 7(1): 123-126 (2003)
2002
Gultekin Özsoyoglu, Abdullah Al-Hamdani, Ismail Sengör
Altingövde, Selma Ayse Özel, Özgür Ulusoy,
Z. Meral Özsoyoglu: Sideway Value Algebra for Object-Relational
Databases. VLDB 2002: 59-70
Nevzat Hurkan Balkir, Gultekin Özsoyoglu, Z. Meral Özsoyoglu:
A Graphical Query Language: VISUAL and Its Query Processing.
IEEE Trans. Knowl. Data Eng. 14(5): 955-978 (2002)
2001
Ismail Sengör Altingövde, Selma Ayse Özel, Özgür
Ulusoy, Gultekin Özsoyoglu, Z. Meral Özsoyoglu: Topic-Centric
Querying of Web Information Resources. DEXA 2001: 699-711
2000
Gultekin Özsoyoglu, Nevzat Hurkan Balkir, Graham Cormode,
Z. Meral Özsoyoglu: Electronic Books in Digital Libraries.
ADL 2000: 5-14
Taekyong Lee, Lei Sheng, Nevzat Hurkan Balkir, Abdullah Al-Hamdani,
Gultekin Özsoyoglu, Z. Meral Özsoyoglu: Query Processing
Techniques for Multimedia Presentations. Multimedia Tools Appl.
11(1): 63-99 (2000)
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